Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXTL3O43909 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXTL3O43909 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EXTL3O43909 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 KRT18P1-202ENST00000452408 1331 ntBASIC19.55■□□□□ 0.72
EXTL3O43909 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.55■□□□□ 0.72
EXTL3O43909 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EXTL3O43909 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 NOC2LP1-202ENST00000452600 2235 ntBASIC19.55■□□□□ 0.72
EXTL3O43909 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
EXTL3O43909 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.55■□□□□ 0.72
EXTL3O43909 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
EXTL3O43909 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.55■□□□□ 0.72
EXTL3O43909 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.55■□□□□ 0.72
EXTL3O43909 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.55■□□□□ 0.72
EXTL3O43909 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.55■□□□□ 0.72
EXTL3O43909 ATP5G2P1-201ENST00000433580 426 ntBASIC19.55■□□□□ 0.72
EXTL3O43909 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.55■□□□□ 0.72
EXTL3O43909 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.55■□□□□ 0.72
EXTL3O43909 AL353801.3-201ENST00000609898 542 ntBASIC19.55■□□□□ 0.72
EXTL3O43909 NPAP1P7-201ENST00000613027 823 ntBASIC19.55■□□□□ 0.72
EXTL3O43909 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EXTL3O43909 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXTL3O43909 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
EXTL3O43909 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 AL845331.1-201ENST00000424978 1190 ntBASIC19.54■□□□□ 0.72
EXTL3O43909 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.54■□□□□ 0.72
EXTL3O43909 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 AP002414.4-201ENST00000589764 1148 ntBASIC19.54■□□□□ 0.72
EXTL3O43909 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 KRT18P55-202ENST00000578578 1546 ntBASIC19.54■□□□□ 0.72
EXTL3O43909 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EXTL3O43909 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.54■□□□□ 0.72
EXTL3O43909 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXTL3O43909 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
EXTL3O43909 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 DRAXINP1-201ENST00000437611 948 ntBASIC19.53■□□□□ 0.72
EXTL3O43909 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EXTL3O43909 MIR3180-1-201ENST00000580374 94 ntBASIC19.53■□□□□ 0.72
EXTL3O43909 MIR3180-3-201ENST00000584616 94 ntBASIC19.53■□□□□ 0.72
EXTL3O43909 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
EXTL3O43909 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
EXTL3O43909 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.53■□□□□ 0.72
EXTL3O43909 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXTL3O43909 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.52■□□□□ 0.72
EXTL3O43909 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EXTL3O43909 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EXTL3O43909 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EXTL3O43909 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms