Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.05■■□□□ 1.28
KCNQ3O43525 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.05■■□□□ 1.28
KCNQ3O43525 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
KCNQ3O43525 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.05■■□□□ 1.28
KCNQ3O43525 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 RPL13AP23-201ENST00000480739 586 ntBASIC23.05■■□□□ 1.28
KCNQ3O43525 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNQ3O43525 AC106730.1-201ENST00000566722 1090 ntBASIC23.05■■□□□ 1.28
KCNQ3O43525 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
KCNQ3O43525 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNQ3O43525 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.05■■□□□ 1.28
KCNQ3O43525 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KCNQ3O43525 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
KCNQ3O43525 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 AC100803.2-201ENST00000562459 1963 ntBASIC23.04■■□□□ 1.28
KCNQ3O43525 FAM220CP-201ENST00000395253 831 ntBASIC23.04■■□□□ 1.28
KCNQ3O43525 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
KCNQ3O43525 DUTP2-201ENST00000519164 463 ntBASIC23.04■■□□□ 1.28
KCNQ3O43525 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNQ3O43525 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNQ3O43525 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNQ3O43525 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNQ3O43525 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNQ3O43525 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ3O43525 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNQ3O43525 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.04■■□□□ 1.28
KCNQ3O43525 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
KCNQ3O43525 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
KCNQ3O43525 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
KCNQ3O43525 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ3O43525 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 POLD2P1-201ENST00000511220 997 ntBASIC23.03■■□□□ 1.28
KCNQ3O43525 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNQ3O43525 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNQ3O43525 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
KCNQ3O43525 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNQ3O43525 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNQ3O43525 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ3O43525 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ3O43525 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
KCNQ3O43525 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ3O43525 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNQ3O43525 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
KCNQ3O43525 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNQ3O43525 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
KCNQ3O43525 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNQ3O43525 BX005266.1-201ENST00000473402 457 ntBASIC23.02■■□□□ 1.28
KCNQ3O43525 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNQ3O43525 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNQ3O43525 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ3O43525 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 AC004408.2-201ENST00000623613 2777 ntBASIC23.01■■□□□ 1.27
KCNQ3O43525 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
KCNQ3O43525 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
KCNQ3O43525 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 IGHV3-22-201ENST00000520721 359 ntBASIC23.01■■□□□ 1.27
KCNQ3O43525 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.01■■□□□ 1.27
KCNQ3O43525 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ3O43525 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ3O43525 PMPCAP1-201ENST00000508114 1576 ntBASIC23.01■■□□□ 1.27
KCNQ3O43525 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms