Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
MSH5O43196 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.57■■□□□ 1.52
MSH5O43196 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 AL139384.1-201ENST00000612143 3047 ntBASIC24.57■■□□□ 1.52
MSH5O43196 AC008764.6-201ENST00000595909 2069 ntBASIC24.57■■□□□ 1.52
MSH5O43196 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
MSH5O43196 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC24.57■■□□□ 1.52
MSH5O43196 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.57■■□□□ 1.52
MSH5O43196 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC24.57■■□□□ 1.52
MSH5O43196 SPDYE13P-201ENST00000445314 798 ntBASIC24.57■■□□□ 1.52
MSH5O43196 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.57■■□□□ 1.52
MSH5O43196 IL12A-205ENST00000480787 863 ntTSL 3 BASIC24.57■■□□□ 1.52
MSH5O43196 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 NEK4P2-201ENST00000580004 1012 ntBASIC24.57■■□□□ 1.52
MSH5O43196 AC011458.1-201ENST00000604034 617 ntBASIC24.57■■□□□ 1.52
MSH5O43196 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC24.57■■□□□ 1.52
MSH5O43196 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MSH5O43196 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
MSH5O43196 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MSH5O43196 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MSH5O43196 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC24.56■■□□□ 1.52
MSH5O43196 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 AL022342.1-201ENST00000400363 863 ntBASIC24.56■■□□□ 1.52
MSH5O43196 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC24.56■■□□□ 1.52
MSH5O43196 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.56■■□□□ 1.52
MSH5O43196 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC24.56■■□□□ 1.52
MSH5O43196 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
MSH5O43196 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.56■■□□□ 1.52
MSH5O43196 EML3-216ENST00000529309 2909 ntTSL 2 BASIC24.56■■□□□ 1.52
MSH5O43196 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 AL513185.3-201ENST00000433335 1300 ntBASIC24.56■■□□□ 1.52
MSH5O43196 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MSH5O43196 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
MSH5O43196 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
MSH5O43196 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 AL009172.1-201ENST00000436365 1098 ntBASIC24.55■■□□□ 1.52
MSH5O43196 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 TSSC2-201ENST00000450217 709 ntBASIC24.55■■□□□ 1.52
MSH5O43196 AC009078.2-202ENST00000463353 338 ntBASIC24.55■■□□□ 1.52
MSH5O43196 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MSH5O43196 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MSH5O43196 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.55■■□□□ 1.52
MSH5O43196 AC012557.2-201ENST00000605919 418 ntBASIC24.55■■□□□ 1.52
MSH5O43196 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.55■■□□□ 1.52
MSH5O43196 AC004263.2-201ENST00000617183 678 ntBASIC24.55■■□□□ 1.52
MSH5O43196 AL138960.2-201ENST00000625145 535 ntBASIC24.55■■□□□ 1.52
MSH5O43196 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.55■■□□□ 1.52
MSH5O43196 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.55■■□□□ 1.52
MSH5O43196 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
MSH5O43196 BICD1-207ENST00000551848 1962 ntBASIC24.54■■□□□ 1.52
MSH5O43196 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC24.54■■□□□ 1.52
MSH5O43196 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.54■■□□□ 1.52
MSH5O43196 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
MSH5O43196 RPF1-202ENST00000370656 724 ntTSL 2 BASIC24.54■■□□□ 1.52
MSH5O43196 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 MTND4LP11-201ENST00000422184 280 ntBASIC24.54■■□□□ 1.52
MSH5O43196 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 BX276092.5-203ENST00000456199 560 ntBASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms