Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.65■□□□□ 0.42
EIF3FO00303 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.65■□□□□ 0.42
EIF3FO00303 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.65■□□□□ 0.42
EIF3FO00303 AC116407.2-201ENST00000613639 860 ntBASIC17.65■□□□□ 0.42
EIF3FO00303 AC004263.2-201ENST00000617183 678 ntBASIC17.65■□□□□ 0.42
EIF3FO00303 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.65■□□□□ 0.42
EIF3FO00303 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
EIF3FO00303 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.64■□□□□ 0.41
EIF3FO00303 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
EIF3FO00303 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
EIF3FO00303 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.64■□□□□ 0.41
EIF3FO00303 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.64■□□□□ 0.41
EIF3FO00303 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.64■□□□□ 0.41
EIF3FO00303 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.64■□□□□ 0.41
EIF3FO00303 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.64■□□□□ 0.41
EIF3FO00303 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.64■□□□□ 0.41
EIF3FO00303 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 AC006116.8-202ENST00000587620 1550 ntBASIC17.64■□□□□ 0.41
EIF3FO00303 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.64■□□□□ 0.41
EIF3FO00303 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.64■□□□□ 0.41
EIF3FO00303 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EIF3FO00303 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EIF3FO00303 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.63■□□□□ 0.41
EIF3FO00303 TSPY12P-201ENST00000421279 868 ntBASIC17.63■□□□□ 0.41
EIF3FO00303 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 AL671277.2-201ENST00000458060 996 ntBASIC17.63■□□□□ 0.41
EIF3FO00303 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.63■□□□□ 0.41
EIF3FO00303 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EIF3FO00303 AC083849.1-201ENST00000615227 514 ntBASIC17.63■□□□□ 0.41
EIF3FO00303 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.63■□□□□ 0.41
EIF3FO00303 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EIF3FO00303 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.63■□□□□ 0.41
EIF3FO00303 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms