Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIC1O00299 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC1O00299 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC1O00299 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CLIC1O00299 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLIC1O00299 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
CLIC1O00299 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIC1O00299 TSPY7P-201ENST00000431358 1114 ntBASIC17.02■□□□□ 0.32
CLIC1O00299 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC1O00299 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.02■□□□□ 0.32
CLIC1O00299 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIC1O00299 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIC1O00299 C2orf69P3-201ENST00000565542 1120 ntBASIC17.02■□□□□ 0.32
CLIC1O00299 MIR4785-201ENST00000585005 73 ntBASIC17.02■□□□□ 0.32
CLIC1O00299 AC010653.2-201ENST00000623505 997 ntBASIC17.02■□□□□ 0.32
CLIC1O00299 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLIC1O00299 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC1O00299 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIC1O00299 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.02■□□□□ 0.31
CLIC1O00299 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC1O00299 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CLIC1O00299 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLIC1O00299 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 AL355312.1-201ENST00000407115 2176 ntBASIC17.01■□□□□ 0.31
CLIC1O00299 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLIC1O00299 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 MIR1238-201ENST00000408483 83 ntBASIC17.01■□□□□ 0.31
CLIC1O00299 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.01■□□□□ 0.31
CLIC1O00299 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.01■□□□□ 0.31
CLIC1O00299 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.01■□□□□ 0.31
CLIC1O00299 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC1O00299 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC1O00299 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC1O00299 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC1O00299 AC132938.6-201ENST00000623828 1655 ntBASIC17.01■□□□□ 0.31
CLIC1O00299 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17■□□□□ 0.31
CLIC1O00299 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17■□□□□ 0.31
CLIC1O00299 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17■□□□□ 0.31
CLIC1O00299 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17■□□□□ 0.31
CLIC1O00299 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17■□□□□ 0.31
CLIC1O00299 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIC1O00299 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17■□□□□ 0.31
CLIC1O00299 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC1O00299 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms