Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 AC244107.1-201ENST00000442033 332 ntBASIC17.59■□□□□ 0.41
C4orf47A7E2U8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 KRT18P41-201ENST00000518924 1277 ntBASIC17.59■□□□□ 0.41
C4orf47A7E2U8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 MIR1199-201ENST00000621445 119 ntBASIC17.59■□□□□ 0.41
C4orf47A7E2U8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
C4orf47A7E2U8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C4orf47A7E2U8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 AC254562.1-201ENST00000417586 456 ntBASIC17.58■□□□□ 0.4
C4orf47A7E2U8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C4orf47A7E2U8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 AC009102.3-201ENST00000623118 1491 ntBASIC17.57■□□□□ 0.4
C4orf47A7E2U8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.57■□□□□ 0.4
C4orf47A7E2U8 KRT18P2-201ENST00000447938 1258 ntBASIC17.57■□□□□ 0.4
C4orf47A7E2U8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 AC005593.1-201ENST00000624894 515 ntBASIC17.57■□□□□ 0.4
C4orf47A7E2U8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C4orf47A7E2U8 HEIH-201ENST00000623091 1652 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms