Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 AC005336.2-201ENST00000593183 939 ntBASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.79■□□□□ 0.6
YJEFN3A6XGL0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 IGHV3-47-201ENST00000425060 335 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 KRT17P6-201ENST00000453795 1220 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 AC074051.2-201ENST00000565115 352 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 AC012615.1-201ENST00000565797 1299 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 Z69720.1-201ENST00000601483 472 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 FLJ13224-201ENST00000313737 1514 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 KRT8P47-201ENST00000604727 1398 ntBASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YJEFN3A6XGL0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 VENTXP7-201ENST00000475503 772 ntBASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 MIR3652-201ENST00000579335 131 ntBASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 CLEC4GP1-201ENST00000596555 870 ntBASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
YJEFN3A6XGL0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
YJEFN3A6XGL0 AC022898.2-201ENST00000616822 1312 ntBASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms