Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 TSPY22P-201ENST00000427496 604 ntBASIC17.15■□□□□ 0.34
LRIT2A6NDA9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 AC116407.4-201ENST00000623319 1061 ntBASIC17.15■□□□□ 0.34
LRIT2A6NDA9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.15■□□□□ 0.34
LRIT2A6NDA9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 PCED1CP-201ENST00000419887 785 ntBASIC17.14■□□□□ 0.33
LRIT2A6NDA9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 AL133373.2-201ENST00000623187 2828 ntBASIC17.14■□□□□ 0.33
LRIT2A6NDA9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LRIT2A6NDA9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 LETM1P2-201ENST00000597330 2178 ntBASIC17.13■□□□□ 0.33
LRIT2A6NDA9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 ARMC10P1-201ENST00000313754 855 ntBASIC17.13■□□□□ 0.33
LRIT2A6NDA9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
LRIT2A6NDA9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 KRT8P26-201ENST00000534154 1276 ntBASIC17.13■□□□□ 0.33
LRIT2A6NDA9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 AC100803.2-201ENST00000562459 1963 ntBASIC17.13■□□□□ 0.33
LRIT2A6NDA9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms