Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KRT18P23-201ENST00000435622 1283 ntBASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SLC25A6P5-201ENST00000435663 894 ntBASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HYMAI.1-201ENST00000620949 238 ntBASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ESPNP-201ENST00000270691 2015 ntBASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GNAS-203ENST00000306120 1878 ntBASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LTB4R2-202ENST00000528054 3092 ntBASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL109659.2-201ENST00000606809 1674 ntBASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HBZP1-201ENST00000354915 429 ntBASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC092597.1-201ENST00000487352 616 ntBASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC008556.1-201ENST00000610908 2040 ntBASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC138028.4-201ENST00000564984 1845 ntBASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MYLKP1-201ENST00000509077 1580 ntBASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms