Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 TSPY23P-201ENST00000440136 739 ntBASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 FAM86EP-206ENST00000510506 987 ntBASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX49Q9Y6V7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 PCDHA12-202ENST00000613593 2588 ntBASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX49Q9Y6V7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 HEIH-201ENST00000623091 1652 ntBASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 AC140113.3-201ENST00000605663 199 ntBASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX49Q9Y6V7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
DDX49Q9Y6V7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms