Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 AC007967.3-201ENST00000434308 558 ntBASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 PRYP5-201ENST00000451909 266 ntBASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.29■□□□□ 0.84
PTCH2Q9Y6C5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 AC004449.1-201ENST00000564240 433 ntBASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
PTCH2Q9Y6C5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 AC006504.4-201ENST00000592118 1568 ntBASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 MIR4745-201ENST00000577608 62 ntBASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTCH2Q9Y6C5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCH2Q9Y6C5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 AP000344.2-201ENST00000512987 629 ntBASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 AC005498.2-205ENST00000593218 784 ntBASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
PTCH2Q9Y6C5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms