Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 AC011270.2-201ENST00000624293 2550 ntBASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 IGHGP-201ENST00000390555 1178 ntBASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 AC024563.2-201ENST00000603282 481 ntBASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 KRT89P-201ENST00000620027 1478 ntBASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA3Q9Y5H0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 BICD1-207ENST00000551848 1962 ntBASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 FP475955.4-201ENST00000623131 1990 ntBASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 Z69720.1-201ENST00000601483 472 ntBASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 AL031008.1-201ENST00000619963 541 ntBASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 AL354751.1-201ENST00000412768 1863 ntBASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA3Q9Y5H0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 AC233702.3-201ENST00000578656 1387 ntBASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA3Q9Y5H0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms