Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.99□□□□□ -0.33
CHTOPQ9Y3Y2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 YBX1P10-201ENST00000444752 975 ntBASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 AP001094.4-201ENST00000579008 2176 ntBASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 MTMR9LP-203ENST00000426597 1545 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms