Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 AF186192.3-201ENST00000583427 947 ntBASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 AL138688.1-201ENST00000624851 1594 ntBASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.39
UBE2D4Q9Y2X8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2D4Q9Y2X8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.58□□□□□ -0.39
UBE2D4Q9Y2X8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2D4Q9Y2X8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
UBE2D4Q9Y2X8 AC124067.4-201ENST00000519691 2379 ntBASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 AC022211.2-201ENST00000585075 2527 ntBASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 ESRRAP1-201ENST00000400596 1257 ntBASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 MESTP1-201ENST00000404287 994 ntBASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 HOXB1-202ENST00000577092 1414 ntBASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D4Q9Y2X8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D4Q9Y2X8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UBE2D4Q9Y2X8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D4Q9Y2X8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D4Q9Y2X8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D4Q9Y2X8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms