Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 POR-209ENST00000439269 1858 ntTSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 SCARNA2-201ENST00000458748 420 ntBASIC24.58■■□□□ 1.53
NINLQ9Y2I6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
NINLQ9Y2I6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
NINLQ9Y2I6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
NINLQ9Y2I6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
NINLQ9Y2I6 AC010460.3-201ENST00000511359 1579 ntBASIC24.58■■□□□ 1.52
NINLQ9Y2I6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
NINLQ9Y2I6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.57■■□□□ 1.52
NINLQ9Y2I6 AL590627.1-203ENST00000421194 1026 ntBASIC24.57■■□□□ 1.52
NINLQ9Y2I6 FAM197Y8-203ENST00000450145 560 ntBASIC24.57■■□□□ 1.52
NINLQ9Y2I6 AF186996.4-201ENST00000467186 377 ntBASIC24.57■■□□□ 1.52
NINLQ9Y2I6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.57■■□□□ 1.52
NINLQ9Y2I6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
NINLQ9Y2I6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 AP001005.1-201ENST00000571755 1248 ntBASIC24.56■■□□□ 1.52
NINLQ9Y2I6 MIR7706-201ENST00000613747 67 ntBASIC24.56■■□□□ 1.52
NINLQ9Y2I6 AP000867.4-201ENST00000641616 219 ntBASIC24.56■■□□□ 1.52
NINLQ9Y2I6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
NINLQ9Y2I6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 AC073648.2-201ENST00000510116 352 ntBASIC24.55■■□□□ 1.52
NINLQ9Y2I6 MTDHP3-201ENST00000594186 672 ntBASIC24.55■■□□□ 1.52
NINLQ9Y2I6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NINLQ9Y2I6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NINLQ9Y2I6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms