Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 AL499627.1-201ENST00000569373 2188 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 FOSL1P1-201ENST00000511041 816 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 AC009065.1-201ENST00000564055 1225 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 AC091304.2-201ENST00000564639 760 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 LINC01711-201ENST00000598340 967 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 GPR32P1-201ENST00000601788 811 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 AL121772.3-201ENST00000610840 674 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 NEFHP1-201ENST00000412845 2629 ntBASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA1Q9UND3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 AC073592.3-201ENST00000625118 1834 ntBASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 AC104819.1-201ENST00000504587 486 ntBASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 AC012615.1-201ENST00000565797 1299 ntBASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA1Q9UND3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms