Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 KRT18P55-202ENST00000578578 1546 ntBASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 AC090616.6-201ENST00000582640 721 ntBASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA4Q9UN74 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 CHCHD2P8-201ENST00000429873 447 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 SLC25A6P5-201ENST00000435663 894 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 MTCL1P1-201ENST00000446207 792 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 AC112698.1-201ENST00000510299 916 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 AL592071.1-201ENST00000611956 408 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 AC100803.2-201ENST00000562459 1963 ntBASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA4Q9UN74 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 AC008764.6-201ENST00000595909 2069 ntBASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 TSSC2-201ENST00000450217 709 ntBASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 IGHV3-41-201ENST00000613121 348 ntBASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA4Q9UN74 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms