Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 AP000867.4-201ENST00000641616 219 ntBASIC20.46■□□□□ 0.87
FBXO40Q9UH90 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FBXO40Q9UH90 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 AC126763.1-201ENST00000552015 2118 ntBASIC20.45■□□□□ 0.86
FBXO40Q9UH90 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 RPL13AP23-201ENST00000480739 586 ntBASIC20.45■□□□□ 0.86
FBXO40Q9UH90 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 AC116407.3-201ENST00000623905 1129 ntBASIC20.45■□□□□ 0.86
FBXO40Q9UH90 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FBXO40Q9UH90 AC093010.1-201ENST00000473625 1624 ntBASIC20.45■□□□□ 0.86
FBXO40Q9UH90 ZNF259P1-201ENST00000407656 1365 ntBASIC20.45■□□□□ 0.86
FBXO40Q9UH90 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC073592.3-201ENST00000625118 1834 ntBASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC122714.2-201ENST00000502787 707 ntBASIC20.44■□□□□ 0.86
FBXO40Q9UH90 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 OR7E14P-202ENST00000530490 1290 ntBASIC20.44■□□□□ 0.86
FBXO40Q9UH90 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 HLA-J-201ENST00000462773 1622 ntBASIC20.44■□□□□ 0.86
FBXO40Q9UH90 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 AC022898.2-201ENST00000616822 1312 ntBASIC20.44■□□□□ 0.86
FBXO40Q9UH90 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FBXO40Q9UH90 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 RPS2P1-201ENST00000434010 821 ntBASIC20.43■□□□□ 0.86
FBXO40Q9UH90 DUTP2-201ENST00000519164 463 ntBASIC20.43■□□□□ 0.86
FBXO40Q9UH90 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FBXO40Q9UH90 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.42■□□□□ 0.86
FBXO40Q9UH90 AC025062.2-201ENST00000605477 670 ntBASIC20.42■□□□□ 0.86
FBXO40Q9UH90 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms