Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 AC112698.1-201ENST00000510299 916 ntBASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 AC093010.1-201ENST00000473625 1624 ntBASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 AC114341.1-201ENST00000618070 349 ntBASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 AL138781.2-201ENST00000617896 1843 ntBASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE7Q9UBL6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AC009533.2-201ENST00000543664 586 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 MIR5100-201ENST00000579544 119 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AL591684.3-201ENST00000605187 298 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AL138831.2-201ENST00000606564 490 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 AC125634.1-201ENST00000438758 1403 ntBASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE7Q9UBL6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE7Q9UBL6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CPNE7Q9UBL6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE7Q9UBL6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms