Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RBM28Q9NW13 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM28Q9NW13 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 CHCHD2P8-201ENST00000429873 447 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 SLC25A6P5-201ENST00000435663 894 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 RN7SL606P-201ENST00000472779 293 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC068472.1-201ENST00000474589 881 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AC016734.2-201ENST00000624325 1377 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM28Q9NW13 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 KRT18P55-202ENST00000578578 1546 ntBASIC20.93■□□□□ 0.94
RBM28Q9NW13 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM28Q9NW13 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 TSSC2-201ENST00000450217 709 ntBASIC20.92■□□□□ 0.94
RBM28Q9NW13 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 IGHV3-41-201ENST00000613121 348 ntBASIC20.92■□□□□ 0.94
RBM28Q9NW13 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM28Q9NW13 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RBM28Q9NW13 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RBM28Q9NW13 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RBM28Q9NW13 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM28Q9NW13 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms