Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 HLA-F-220ENST00000434407 884 ntBASIC18.97■□□□□ 0.63
CD248Q9HCU0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 AC012313.10-201ENST00000623509 926 ntBASIC18.97■□□□□ 0.63
CD248Q9HCU0 AL161938.1-201ENST00000569833 2180 ntBASIC18.97■□□□□ 0.63
CD248Q9HCU0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 TEX21P-204ENST00000641479 1693 ntBASIC18.97■□□□□ 0.63
CD248Q9HCU0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CD248Q9HCU0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD248Q9HCU0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 AC018695.7-201ENST00000624587 2492 ntBASIC18.96■□□□□ 0.63
CD248Q9HCU0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CD248Q9HCU0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD248Q9HCU0 AC080080.1-201ENST00000625121 2420 ntBASIC18.95■□□□□ 0.62
CD248Q9HCU0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.95■□□□□ 0.62
CD248Q9HCU0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD248Q9HCU0 MIR3180-1-201ENST00000580374 94 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms