Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 AC073314.1-201ENST00000568729 2216 ntBASIC16.66■□□□□ 0.26
CHD8Q9HCK8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 DDX43P3-201ENST00000441064 443 ntBASIC16.66■□□□□ 0.26
CHD8Q9HCK8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD8Q9HCK8 AC092919.2-201ENST00000623631 1645 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AC112907.3-201ENST00000577781 2400 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AC023141.13-201ENST00000604991 943 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AC008667.4-201ENST00000607370 168 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AL024508.2-201ENST00000607749 1894 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 AL133338.1-201ENST00000565695 1517 ntBASIC16.65■□□□□ 0.26
CHD8Q9HCK8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD8Q9HCK8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.64■□□□□ 0.25
CHD8Q9HCK8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC007967.3-201ENST00000434308 558 ntBASIC16.64■□□□□ 0.25
CHD8Q9HCK8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC125807.1-201ENST00000483097 614 ntBASIC16.64■□□□□ 0.25
CHD8Q9HCK8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHD8Q9HCK8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 IRX1P1-201ENST00000438849 1838 ntBASIC16.63■□□□□ 0.25
CHD8Q9HCK8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 AC008677.1-201ENST00000519230 1561 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms