Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBB1Q9H4B7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TUBB1Q9H4B7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 FAM87A-204ENST00000613235 858 ntBASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBB1Q9H4B7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TUBB1Q9H4B7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.39■□□□□ 0.38
TUBB1Q9H4B7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 MIR3917-201ENST00000580971 93 ntBASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 KRT17P2-201ENST00000300992 1314 ntBASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
TUBB1Q9H4B7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms