Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VPS11Q9H270 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS11Q9H270 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS11Q9H270 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VPS11Q9H270 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VPS11Q9H270 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.19■□□□□ 0.5
VPS11Q9H270 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VPS11Q9H270 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.19■□□□□ 0.5
VPS11Q9H270 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 AC142381.4-202ENST00000563973 229 ntBASIC18.19■□□□□ 0.5
VPS11Q9H270 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.19■□□□□ 0.5
VPS11Q9H270 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS11Q9H270 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 AL023806.1-201ENST00000603994 1649 ntBASIC18.19■□□□□ 0.5
VPS11Q9H270 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS11Q9H270 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS11Q9H270 AC084018.2-201ENST00000613093 2607 ntBASIC18.19■□□□□ 0.5
VPS11Q9H270 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.18■□□□□ 0.5
VPS11Q9H270 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 MIR149-201ENST00000384879 89 ntBASIC18.18■□□□□ 0.5
VPS11Q9H270 TSPY20P-201ENST00000450910 630 ntBASIC18.18■□□□□ 0.5
VPS11Q9H270 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.18■□□□□ 0.5
VPS11Q9H270 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS11Q9H270 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS11Q9H270 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS11Q9H270 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS11Q9H270 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS11Q9H270 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 RPS2P55-201ENST00000397318 883 ntBASIC18.17■□□□□ 0.5
VPS11Q9H270 AC107956.1-201ENST00000494359 873 ntBASIC18.17■□□□□ 0.5
VPS11Q9H270 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VPS11Q9H270 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 REXO1L10P-201ENST00000615707 1290 ntBASIC18.17■□□□□ 0.5
VPS11Q9H270 REXO1L12P-201ENST00000622156 912 ntBASIC18.17■□□□□ 0.5
VPS11Q9H270 AC113410.3-201ENST00000623366 203 ntBASIC18.17■□□□□ 0.5
VPS11Q9H270 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS11Q9H270 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS11Q9H270 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms