Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 AL390961.4-201ENST00000623958 2535 ntBASIC21.4■■□□□ 1.02
NBPF3Q9H094 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF3Q9H094 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF3Q9H094 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
NBPF3Q9H094 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF3Q9H094 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
NBPF3Q9H094 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF3Q9H094 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.39■■□□□ 1.02
NBPF3Q9H094 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
NBPF3Q9H094 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF3Q9H094 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 AC068472.1-201ENST00000474589 881 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 TPSP2-201ENST00000561760 610 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 AP005901.3-202ENST00000581653 237 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 AP002414.4-201ENST00000589764 1148 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 AL353801.3-201ENST00000609898 542 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 AC100803.2-201ENST00000562459 1963 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.39■■□□□ 1.01
NBPF3Q9H094 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF3Q9H094 AC007613.1-201ENST00000572811 2597 ntBASIC21.39■■□□□ 1.01
NBPF3Q9H094 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 TSPY19P-201ENST00000418461 509 ntBASIC21.38■■□□□ 1.01
NBPF3Q9H094 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 KRT18P65-201ENST00000439811 1286 ntBASIC21.38■■□□□ 1.01
NBPF3Q9H094 TSPY18P-201ENST00000441642 509 ntBASIC21.38■■□□□ 1.01
NBPF3Q9H094 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 AC009154.2-201ENST00000621177 724 ntBASIC21.38■■□□□ 1.01
NBPF3Q9H094 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NBPF3Q9H094 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NBPF3Q9H094 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 TSPY12P-201ENST00000421279 868 ntBASIC21.37■■□□□ 1.01
NBPF3Q9H094 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 DUTP2-201ENST00000519164 463 ntBASIC21.37■■□□□ 1.01
NBPF3Q9H094 LINC01711-201ENST00000598340 967 ntBASIC21.37■■□□□ 1.01
NBPF3Q9H094 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NBPF3Q9H094 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NBPF3Q9H094 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NBPF3Q9H094 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.36■■□□□ 1.01
NBPF3Q9H094 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms