Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 AL049597.2-201ENST00000565575 961 ntBASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 GPR32P1-201ENST00000601788 811 ntBASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 AL353692.3-201ENST00000407031 1396 ntBASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 LINC01238-205ENST00000567549 1107 ntBASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSER1Q9C0I3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 AL671277.2-201ENST00000458060 996 ntBASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 AL390719.2-201ENST00000606993 987 ntBASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 AL590326.2-201ENST00000625139 305 ntBASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSER1Q9C0I3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 TSPY12P-201ENST00000421279 868 ntBASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 RNF126P1-202ENST00000569893 925 ntBASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AC005332.3-201ENST00000589904 676 ntBASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.18■□□□□ 0.82
CCSER1Q9C0I3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCSER1Q9C0I3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms