Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM2Q9C040 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM2Q9C040 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM2Q9C040 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM2Q9C040 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM2Q9C040 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM2Q9C040 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 AC010203.1-204ENST00000548782 407 ntBASIC16.64■□□□□ 0.25
TRIM2Q9C040 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 AL590326.2-201ENST00000625139 305 ntBASIC16.64■□□□□ 0.25
TRIM2Q9C040 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM2Q9C040 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM2Q9C040 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.63■□□□□ 0.25
TRIM2Q9C040 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 MIR3917-201ENST00000580971 93 ntBASIC16.63■□□□□ 0.25
TRIM2Q9C040 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM2Q9C040 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM2Q9C040 LETM1P2-201ENST00000597330 2178 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AC026471.1-201ENST00000564629 3026 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AP000997.3-201ENST00000623333 2250 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms