Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 REXO1L6P-202ENST00000619970 1078 ntBASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAIPQ9BWF2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAIPQ9BWF2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 AC090164.3-201ENST00000610780 2143 ntBASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 TSPY12P-201ENST00000421279 868 ntBASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 BNIP3P18-201ENST00000593976 575 ntBASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 AL121912.1-201ENST00000603683 238 ntBASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 AC009154.2-201ENST00000621177 724 ntBASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAIPQ9BWF2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AC020763.4-201ENST00000623414 4170 ntBASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AC135050.7-201ENST00000624508 2218 ntBASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AKR1C7P-201ENST00000305623 895 ntBASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 MINOS1P3-201ENST00000457048 203 ntBASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 AL499627.1-201ENST00000569373 2188 ntBASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAIPQ9BWF2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 SAPCD2P3-201ENST00000455031 850 ntBASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 AC009078.2-202ENST00000463353 338 ntBASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 AP002469.2-201ENST00000531724 424 ntBASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAIPQ9BWF2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms