Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 AL137013.1-201ENST00000432946 1228 ntBASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 AL138966.2-201ENST00000621997 464 ntBASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
HERPUD2Q9BSE4 SIRPAP1-201ENST00000448467 1770 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 LINC00602-201ENST00000629776 2065 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 AIRN-201ENST00000601203 4374 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 PCDHA12-202ENST00000613593 2588 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 AC005521.1-201ENST00000393351 872 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 TMPOP1-202ENST00000424642 1267 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 PVRIG2P-201ENST00000435460 978 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 GCSHP2-201ENST00000560971 527 ntBASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
HERPUD2Q9BSE4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TERF1P1-201ENST00000311003 1181 ntBASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 RN7SL850P-201ENST00000579959 291 ntBASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 AC079602.3-201ENST00000623931 403 ntBASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
HERPUD2Q9BSE4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 LIN28AP1-201ENST00000429574 405 ntBASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 AC141257.4-201ENST00000634557 245 ntBASIC18.68■□□□□ 0.58
HERPUD2Q9BSE4 AC136944.6-201ENST00000634818 245 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms