Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE1Q99829 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE1Q99829 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE1Q99829 FZD10-202ENST00000539839 3282 ntBASIC18.07■□□□□ 0.48
CPNE1Q99829 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE1Q99829 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE1Q99829 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CPNE1Q99829 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPNE1Q99829 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE1Q99829 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE1Q99829 AC139713.2-201ENST00000641328 2723 ntBASIC18.07■□□□□ 0.48
CPNE1Q99829 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 INGX-201ENST00000359239 846 ntBASIC18.06■□□□□ 0.48
CPNE1Q99829 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 SNORA78-201ENST00000459373 127 ntBASIC18.06■□□□□ 0.48
CPNE1Q99829 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE1Q99829 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 AL512604.3-201ENST00000569583 964 ntBASIC18.06■□□□□ 0.48
CPNE1Q99829 AC024243.1-201ENST00000609234 778 ntBASIC18.06■□□□□ 0.48
CPNE1Q99829 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE1Q99829 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE1Q99829 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE1Q99829 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE1Q99829 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 AC022898.2-201ENST00000616822 1312 ntBASIC18.05■□□□□ 0.48
CPNE1Q99829 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE1Q99829 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE1Q99829 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CPNE1Q99829 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 AC009947.2-201ENST00000444014 672 ntBASIC18.05■□□□□ 0.48
CPNE1Q99829 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE1Q99829 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE1Q99829 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE1Q99829 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CPNE1Q99829 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE1Q99829 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE1Q99829 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE1Q99829 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CPNE1Q99829 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE1Q99829 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPNE1Q99829 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE1Q99829 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CPNE1Q99829 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms