Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TM9SF2Q99805 GPAT2P1-201ENST00000444924 1672 ntBASIC16.78■□□□□ 0.28
TM9SF2Q99805 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM9SF2Q99805 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AL023284.2-201ENST00000405850 579 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 AL031133.1-201ENST00000406807 723 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AL359075.1-203ENST00000462729 1002 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.77■□□□□ 0.28
TM9SF2Q99805 MIR3180-5-201ENST00000583743 153 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.77■□□□□ 0.28
TM9SF2Q99805 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM9SF2Q99805 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.77■□□□□ 0.27
TM9SF2Q99805 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TM9SF2Q99805 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.77■□□□□ 0.27
TM9SF2Q99805 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.77■□□□□ 0.27
TM9SF2Q99805 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM9SF2Q99805 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
TM9SF2Q99805 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 AL121956.5-201ENST00000625261 221 ntBASIC16.76■□□□□ 0.27
TM9SF2Q99805 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TM9SF2Q99805 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF2Q99805 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms