Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.55■□□□□ 0.72
ALPK3Q96L96 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ALPK3Q96L96 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 AL627223.1-201ENST00000416693 442 ntBASIC19.54■□□□□ 0.72
ALPK3Q96L96 UGT1A2P-201ENST00000454886 866 ntBASIC19.54■□□□□ 0.72
ALPK3Q96L96 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.54■□□□□ 0.72
ALPK3Q96L96 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALPK3Q96L96 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.53■□□□□ 0.72
ALPK3Q96L96 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.53■□□□□ 0.72
ALPK3Q96L96 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALPK3Q96L96 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ALPK3Q96L96 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 AC067863.1-201ENST00000494933 530 ntBASIC19.52■□□□□ 0.72
ALPK3Q96L96 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 AL353135.1-201ENST00000606729 504 ntBASIC19.52■□□□□ 0.72
ALPK3Q96L96 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.52■□□□□ 0.72
ALPK3Q96L96 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALPK3Q96L96 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALPK3Q96L96 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALPK3Q96L96 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
ALPK3Q96L96 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALPK3Q96L96 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
ALPK3Q96L96 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 GAPDHP21-201ENST00000450301 1010 ntBASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALPK3Q96L96 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.51■□□□□ 0.71
ALPK3Q96L96 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms