Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 KRT18P65-201ENST00000439811 1286 ntBASIC15.16■□□□□ 0.02
TIMD4Q96H15 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 AC138894.3-201ENST00000603787 634 ntBASIC15.16■□□□□ 0.02
TIMD4Q96H15 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 BX323043.1-201ENST00000641006 1765 ntBASIC15.16■□□□□ 0.02
TIMD4Q96H15 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TIMD4Q96H15 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TIMD4Q96H15 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 FOSL1P1-201ENST00000511041 816 ntBASIC15.15■□□□□ 0.02
TIMD4Q96H15 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 AC126763.1-201ENST00000552015 2118 ntBASIC15.15■□□□□ 0.02
TIMD4Q96H15 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 AC018445.3-201ENST00000624177 1945 ntBASIC15.15■□□□□ 0.02
TIMD4Q96H15 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TIMD4Q96H15 AC073592.3-201ENST00000625118 1834 ntBASIC15.15■□□□□ 0.02
TIMD4Q96H15 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMD4Q96H15 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AP000974.1-201ENST00000623909 2387 ntBASIC15.14■□□□□ 0.01
TIMD4Q96H15 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 LINC01126-201ENST00000623515 1646 ntBASIC15.14■□□□□ 0.01
TIMD4Q96H15 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 NSUN5P1-202ENST00000421140 1535 ntBASIC15.14■□□□□ 0.01
TIMD4Q96H15 NSUN5P2-203ENST00000457352 1529 ntBASIC15.14■□□□□ 0.01
TIMD4Q96H15 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMD4Q96H15 AC005082.1-201ENST00000413042 2259 ntBASIC15.14■□□□□ 0.01
TIMD4Q96H15 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms