Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 AC090616.6-201ENST00000582640 721 ntBASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 AL353801.3-201ENST00000609898 542 ntBASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 KRT8P47-201ENST00000604727 1398 ntBASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTHRC1Q96CG8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 GUSBP12-201ENST00000513727 720 ntBASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AL121672.3-201ENST00000608644 468 ntBASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AP000550.4-202ENST00000639755 178 ntBASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 IER3-202ENST00000376377 1350 ntBASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AC016734.2-201ENST00000624325 1377 ntBASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTHRC1Q96CG8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 AL358472.4-201ENST00000633140 710 ntBASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTHRC1Q96CG8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
CTHRC1Q96CG8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
CTHRC1Q96CG8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTHRC1Q96CG8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms