Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH3KBP1Q96B97 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SH3KBP1Q96B97 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 KRT8P50-201ENST00000562022 1438 ntBASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 AP003733.1-201ENST00000491725 852 ntBASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SH3KBP1Q96B97 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SH3KBP1Q96B97 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 TSPY22P-201ENST00000427496 604 ntBASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 AC024563.2-201ENST00000603282 481 ntBASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH3KBP1Q96B97 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC135050.7-201ENST00000624508 2218 ntBASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC008687.5-201ENST00000593746 558 ntBASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC092329.2-201ENST00000598402 547 ntBASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC016734.2-201ENST00000624325 1377 ntBASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms