Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40AQ8WXH6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 AD000864.1-201ENST00000624076 2295 ntBASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40AQ8WXH6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 AL096828.2-201ENST00000567259 1965 ntBASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 KRT18P41-201ENST00000518924 1277 ntBASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 AC005363.2-201ENST00000618631 242 ntBASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB40AQ8WXH6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 AC080080.1-201ENST00000625121 2420 ntBASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 AC006116.8-202ENST00000587620 1550 ntBASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB40AQ8WXH6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms