Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SSH3Q8TE77 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.27■■□□□ 1.16
SSH3Q8TE77 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.27■■□□□ 1.16
SSH3Q8TE77 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SSH3Q8TE77 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.27■■□□□ 1.16
SSH3Q8TE77 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SSH3Q8TE77 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SSH3Q8TE77 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SSH3Q8TE77 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
SSH3Q8TE77 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.27■■□□□ 1.15
SSH3Q8TE77 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 TOB2P1-201ENST00000469761 992 ntBASIC22.26■■□□□ 1.15
SSH3Q8TE77 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.26■■□□□ 1.15
SSH3Q8TE77 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SSH3Q8TE77 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.26■■□□□ 1.15
SSH3Q8TE77 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 AC011840.4-201ENST00000578471 627 ntBASIC22.25■■□□□ 1.15
SSH3Q8TE77 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.25■■□□□ 1.15
SSH3Q8TE77 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SSH3Q8TE77 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SSH3Q8TE77 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 AC092329.2-201ENST00000598402 547 ntBASIC22.24■■□□□ 1.15
SSH3Q8TE77 AL138831.2-201ENST00000606564 490 ntBASIC22.24■■□□□ 1.15
SSH3Q8TE77 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.24■■□□□ 1.15
SSH3Q8TE77 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 AC125634.1-201ENST00000438758 1403 ntBASIC22.23■■□□□ 1.15
SSH3Q8TE77 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 AC096633.1-201ENST00000422446 749 ntBASIC22.23■■□□□ 1.15
SSH3Q8TE77 IGHV3-47-201ENST00000425060 335 ntBASIC22.23■■□□□ 1.15
SSH3Q8TE77 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.23■■□□□ 1.15
SSH3Q8TE77 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SSH3Q8TE77 NOC2LP2-201ENST00000407594 1944 ntBASIC22.23■■□□□ 1.15
SSH3Q8TE77 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms