Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.28■■□□□ 1
TRPM4Q8TD43 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRPM4Q8TD43 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRPM4Q8TD43 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRPM4Q8TD43 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRPM4Q8TD43 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 IGLL3P-201ENST00000412472 434 ntBASIC21.27■■□□□ 1
TRPM4Q8TD43 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.27■■□□□ 1
TRPM4Q8TD43 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.27■■□□□ 1
TRPM4Q8TD43 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.27■■□□□ 1
TRPM4Q8TD43 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.27■■□□□ 1
TRPM4Q8TD43 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.27■■□□□ 1
TRPM4Q8TD43 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.27■■□□□ 1
TRPM4Q8TD43 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TRPM4Q8TD43 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.27■■□□□ 1
TRPM4Q8TD43 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.27■■□□□ 1
TRPM4Q8TD43 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.27■■□□□ 1
TRPM4Q8TD43 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRPM4Q8TD43 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRPM4Q8TD43 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRPM4Q8TD43 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 AL139400.1-201ENST00000366220 510 ntBASIC21.26■□□□□ 0.99
TRPM4Q8TD43 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 IGHV3-65-201ENST00000523210 341 ntBASIC21.26■□□□□ 0.99
TRPM4Q8TD43 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 AC004790.2-201ENST00000623588 572 ntBASIC21.26■□□□□ 0.99
TRPM4Q8TD43 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRPM4Q8TD43 PKD1P6-201ENST00000343738 4769 ntBASIC21.25■□□□□ 0.99
TRPM4Q8TD43 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 KRT8P47-201ENST00000604727 1398 ntBASIC21.25■□□□□ 0.99
TRPM4Q8TD43 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.25■□□□□ 0.99
TRPM4Q8TD43 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 AC148477.5-201ENST00000625164 1645 ntBASIC21.25■□□□□ 0.99
TRPM4Q8TD43 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.25■□□□□ 0.99
TRPM4Q8TD43 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRPM4Q8TD43 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms