Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBA3Q8TBC4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 AC138028.4-201ENST00000564984 1845 ntBASIC19.12■□□□□ 0.65
UBA3Q8TBC4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 TSPY12P-201ENST00000421279 868 ntBASIC19.12■□□□□ 0.65
UBA3Q8TBC4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBA3Q8TBC4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBA3Q8TBC4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 AC016734.2-201ENST00000624325 1377 ntBASIC19.1■□□□□ 0.65
UBA3Q8TBC4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBA3Q8TBC4 BX276092.5-203ENST00000456199 560 ntBASIC19.1■□□□□ 0.65
UBA3Q8TBC4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms