Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AL353692.3-201ENST00000407031 1396 ntBASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AC011498.5-201ENST00000592027 486 ntBASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AL390719.2-201ENST00000606993 987 ntBASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 AL358472.4-201ENST00000633140 710 ntBASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LPCAT1Q8NF37 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 IER3-202ENST00000376377 1350 ntBASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LPCAT1Q8NF37 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 TSPY22P-201ENST00000427496 604 ntBASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LPCAT1Q8NF37 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms