Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 FAM197Y3-203ENST00000618346 717 ntBASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 TEX21P-204ENST00000641479 1693 ntBASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 KRT8P32-201ENST00000512863 1461 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 AL591424.1-201ENST00000442569 1213 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 FGFR3P6-201ENST00000457012 610 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 AC145285.3-201ENST00000564603 959 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 MTDHP3-201ENST00000594186 672 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF248Q8NDW4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 MED15P5-201ENST00000423150 992 ntBASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC055717.3-201ENST00000622967 595 ntBASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AC098818.2-201ENST00000564925 2320 ntBASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF248Q8NDW4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 AC104109.2-201ENST00000602919 1418 ntBASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms