Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC024243.1-201ENST00000609234 778 ntBASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
ZNF439Q8NDP4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 AL096828.2-201ENST00000567259 1965 ntBASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 REXO1L9P-201ENST00000604264 2108 ntBASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF439Q8NDP4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 AL024508.2-201ENST00000607749 1894 ntBASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 LINC01126-201ENST00000623515 1646 ntBASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 AL138966.2-201ENST00000621997 464 ntBASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF439Q8NDP4 AC138028.4-201ENST00000564984 1845 ntBASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ZNF439Q8NDP4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms