Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 KRT8P47-201ENST00000604727 1398 ntBASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01555Q8NAE3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 AC246785.2-201ENST00000432512 513 ntBASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 AC011840.4-201ENST00000578471 627 ntBASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 AC007613.1-201ENST00000572811 2597 ntBASIC17.35■□□□□ 0.37
LINC01555Q8NAE3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AP000867.3-201ENST00000524675 377 ntBASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AC005336.2-201ENST00000593183 939 ntBASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
LINC01555Q8NAE3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01555Q8NAE3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 AC022898.2-201ENST00000616822 1312 ntBASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms