Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 MIR935-201ENST00000401179 91 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 SLC25A1P2-201ENST00000430693 912 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 TSPY17P-201ENST00000450329 467 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AC128676.1-201ENST00000454392 318 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AC090192.1-201ENST00000517740 490 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AP005242.2-201ENST00000580065 1175 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 CD177P1-201ENST00000606252 935 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AP001412.1-201ENST00000608405 714 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 AL024508.2-201ENST00000607749 1894 ntBASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01561Q8N1V8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 PKD1P1-201ENST00000458669 6805 ntBASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 FAM197Y1-201ENST00000421178 764 ntBASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 LINC01451-201ENST00000623792 534 ntBASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC01561Q8N1V8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01561Q8N1V8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms