Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 AC066615.1-201ENST00000640911 628 ntBASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 AL121761.2-201ENST00000598007 1648 ntBASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 AC009102.3-201ENST00000623118 1491 ntBASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 RPPH1-201ENST00000516869 333 ntBASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM42Q8IWZ5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AC124067.4-201ENST00000519691 2379 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 MIR149-201ENST00000384879 89 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 KRASP1-201ENST00000407852 552 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AC239809.2-201ENST00000415381 517 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 MCCD1P1-208ENST00000445732 328 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AL359736.2-201ENST00000621992 437 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 FAM197Y4-202ENST00000622692 608 ntBASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM42Q8IWZ5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM42Q8IWZ5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM42Q8IWZ5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms