Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GPX1P1-201ENST00000388829 606 ntBASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 AC010980.2-201ENST00000587099 1412 ntBASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 AC105917.1-201ENST00000506637 2539 ntBASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 KRT18P61-201ENST00000585825 1298 ntBASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 RAP2CP1-201ENST00000605103 478 ntBASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CROCCP3Q8IVE0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 AL139246.5-201ENST00000606645 996 ntBASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 BID-214ENST00000617586 542 ntTSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 OR10C1-204ENST00000622521 1039 ntBASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 AL138688.1-201ENST00000624851 1594 ntBASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CROCCP3Q8IVE0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 AC112777.1-201ENST00000540175 1423 ntBASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CROCCP3Q8IVE0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms