Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC133552.2-202ENST00000575694 574 ntBASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 AL136379.1-201ENST00000623471 2642 ntBASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 TSPY23P-201ENST00000440136 739 ntBASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 AC023824.1-201ENST00000562945 2975 ntBASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 AC087623.3-201ENST00000607047 1098 ntBASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 AL357033.4-201ENST00000617703 1807 ntBASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD2Q8IV50 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 RAP2CP1-201ENST00000605103 478 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MIR6821-201ENST00000617625 74 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AL121906.2-201ENST00000621597 723 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 MYLKP1-201ENST00000509077 1580 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 AC133963.1-201ENST00000504166 1679 ntBASIC15.86■□□□□ 0.13
LYSMD2Q8IV50 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms