Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC010507.1-201ENST00000633895 436 ntBASIC22.54■■□□□ 1.2
COL23A1Q86Y22 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.54■■□□□ 1.2
COL23A1Q86Y22 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AL499627.1-201ENST00000569373 2188 ntBASIC22.53■■□□□ 1.2
COL23A1Q86Y22 AL032819.2-201ENST00000624543 2162 ntBASIC22.53■■□□□ 1.2
COL23A1Q86Y22 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 BCAR1-209ENST00000546196 1340 ntBASIC22.53■■□□□ 1.2
COL23A1Q86Y22 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL23A1Q86Y22 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 AL158211.5-201ENST00000623583 2518 ntBASIC22.52■■□□□ 1.2
COL23A1Q86Y22 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 AL513210.1-201ENST00000629608 234 ntBASIC22.52■■□□□ 1.2
COL23A1Q86Y22 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL23A1Q86Y22 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 ACTG1P14-201ENST00000446382 1122 ntBASIC22.51■■□□□ 1.19
COL23A1Q86Y22 AC109322.1-201ENST00000524499 1264 ntBASIC22.51■■□□□ 1.19
COL23A1Q86Y22 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.51■■□□□ 1.19
COL23A1Q86Y22 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AC004461.1-201ENST00000412461 403 ntBASIC22.5■■□□□ 1.19
COL23A1Q86Y22 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AL020989.1-201ENST00000422979 469 ntBASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AC096734.2-201ENST00000562054 433 ntBASIC22.5■■□□□ 1.19
COL23A1Q86Y22 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 AC004835.2-201ENST00000603762 682 ntBASIC22.5■■□□□ 1.19
COL23A1Q86Y22 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL23A1Q86Y22 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 AC148477.5-201ENST00000625164 1645 ntBASIC22.49■■□□□ 1.19
COL23A1Q86Y22 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms