Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 GCSHP2-201ENST00000560971 527 ntBASIC15.97■□□□□ 0.15
RTTNQ86VV8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 ABALON-201ENST00000629058 1903 ntBASIC15.97■□□□□ 0.15
RTTNQ86VV8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AL096828.2-201ENST00000567259 1965 ntBASIC15.97■□□□□ 0.15
RTTNQ86VV8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RTTNQ86VV8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTTNQ86VV8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AL671277.2-201ENST00000458060 996 ntBASIC15.96■□□□□ 0.15
RTTNQ86VV8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AC140113.3-201ENST00000605663 199 ntBASIC15.96■□□□□ 0.15
RTTNQ86VV8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AC068880.1-201ENST00000507289 2297 ntBASIC15.96■□□□□ 0.15
RTTNQ86VV8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AC104390.1-201ENST00000555663 520 ntBASIC15.96■□□□□ 0.15
RTTNQ86VV8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 AL671883.3-201ENST00000603274 991 ntBASIC15.96■□□□□ 0.15
RTTNQ86VV8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RTTNQ86VV8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTTNQ86VV8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.96■□□□□ 0.14
RTTNQ86VV8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RTTNQ86VV8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RTTNQ86VV8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.96■□□□□ 0.14
RTTNQ86VV8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RTTNQ86VV8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RTTNQ86VV8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RTTNQ86VV8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.96■□□□□ 0.14
RTTNQ86VV8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.95■□□□□ 0.14
RTTNQ86VV8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
RTTNQ86VV8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 AC024243.1-201ENST00000609234 778 ntBASIC15.95■□□□□ 0.14
RTTNQ86VV8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.95■□□□□ 0.14
RTTNQ86VV8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RTTNQ86VV8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.95■□□□□ 0.14
RTTNQ86VV8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTTNQ86VV8 HMGN1P19-201ENST00000436976 333 ntBASIC15.95■□□□□ 0.14
RTTNQ86VV8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.95■□□□□ 0.14
RTTNQ86VV8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms