Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC009102.3-201ENST00000623118 1491 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 PHGDH-209ENST00000641074 1780 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 MIR149-201ENST00000384879 89 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC128676.1-201ENST00000454392 318 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 MIR3180-5-201ENST00000583743 153 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.37■□□□□ 0.21
LCN1P1Q5VSP4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 MFAP1P1-201ENST00000442257 1255 ntBASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LCN1P1Q5VSP4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 CA15P1-201ENST00000481698 905 ntBASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P1Q5VSP4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms